94 lines
3.1 KiB
Docker
94 lines
3.1 KiB
Docker
FROM nvidia/cuda:11.8.0-runtime-ubuntu22.04
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LABEL maintainer="Bayes Cluster Maintenance Group <"
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ARG NB_USER="bayes"
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ARG NB_UID="1000"
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ARG NB_GID="100"
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SHELL ["/bin/bash", "-o", "pipefail", "-c"]
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# Install all OS dependencies for fully functional notebook server
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USER root
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ENV DEBIAN_FRONTEND noninteractive
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RUN apt-get update --yes && \
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apt-get upgrade --yes && \
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apt-get install --yes --no-install-recommends \
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bzip2 \
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ca-certificates \
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fonts-liberation \
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locales \
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pandoc \
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run-one \
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sudo \
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tini \
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wget \
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curl && \
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apt-get clean && rm -rf /var/lib/apt/lists/* && \
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echo "en_US.UTF-8 UTF-8" > /etc/locale.gen && \
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locale-gen
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RUN adduser --disabled-password \
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--gecos "Default user" \
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--uid ${NB_UID} \
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${NB_USER}
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# Configure environment
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ENV CONDA_DIR=/opt/conda \
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SHELL=/bin/bash \
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NB_USER="${NB_USER}" \
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NB_UID=${NB_UID} \
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NB_GID=${NB_GID} \
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LC_ALL=en_US.UTF-8 \
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LANG=en_US.UTF-8 \
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LANGUAGE=en_US.UTF-8
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ENV PATH="${CONDA_DIR}/bin:${PATH}" \
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HOME="/home/${NB_USER}"
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COPY fix-permissions /usr/local/bin/fix-permissions
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RUN chmod a+rx /usr/local/bin/fix-permissions
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RUN mkdir "/home/${NB_USER}/work" && \
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fix-permissions "/home/${NB_USER}"
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RUN fix-permissions "/home/${NB_USER}"
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# Install miniconda
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ENV CONDA_URL="https://mirrors.bfsu.edu.cn/anaconda/miniconda/Miniconda3-latest-Linux-x86_64.sh"
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RUN curl -LO ${CONDA_URL}
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RUN bash Miniconda3-latest-Linux-x86_64.sh -p ${CONDA_DIR} -b
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RUN rm -rf Miniconda3-latest-Linux-x86_64.sh
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RUN conda config --system --prepend channels conda-forge
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RUN chown ${NB_UID}:${NB_GID} ${CONDA_DIR}
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RUN conda init
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COPY condarc /home/${NB_USER}/.condarc
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RUN conda install -c anaconda jupyter
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RUN conda install -c conda-forge jupyterlab
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RUN conda install -c conda-forge jupyterhub
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RUN conda config --system --prepend envs_dirs '/home/${NB_USER}/.conda/envs'
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EXPOSE 8888
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ENTRYPOINT ["tini", "--"]
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CMD ["jupyter", "lab"]
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# Copy local files as late as possible to avoid cache busting
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COPY start.sh start-notebook.sh start-singleuser.sh /usr/local/bin/
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# Currently need to have both jupyter_notebook_config and jupyter_server_config to support classic and lab
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COPY jupyter_server_config.py /etc/jupyter/
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# Fix permissions on /etc/jupyter as root
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USER root
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# Legacy for Jupyter Notebook Server, see: [#1205](https://github.com/jupyter/docker-stacks/issues/1205)
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RUN sed -re "s/c.ServerApp/c.NotebookApp/g" \
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/etc/jupyter/jupyter_server_config.py > /etc/jupyter/jupyter_notebook_config.py && \
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fix-permissions /etc/jupyter/
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# HEALTHCHECK documentation: https://docs.docker.com/engine/reference/builder/#healthcheck
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# This healtcheck works well for `lab`, `notebook`, `nbclassic`, `server` and `retro` jupyter commands
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# https://github.com/jupyter/docker-stacks/issues/915#issuecomment-1068528799
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HEALTHCHECK --interval=15s --timeout=3s --start-period=5s --retries=3 \
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CMD wget -O- --no-verbose --tries=1 --no-check-certificate \
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http${GEN_CERT:+s}://localhost:8888${JUPYTERHUB_SERVICE_PREFIX:-/}api || exit 1
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# Switch back to jovyan to avoid accidental container runs as root
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USER ${NB_UID}
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WORKDIR "${HOME}" |